Microbial ecology is the study of how micro-organisms interact with each other and with their environment. The whole field is thus a study of a dynamic system where properties of the system emerge from the constraints imposed by the chemistry of the environment, physical laws, and the biological strategies that have evolved in the interacting micro-organisms. The struggle to understand these interactions implies the analysis of phenomena occurring on spatial scales from that of viruses (10-8m) to that of ocean chlorophyll distributions (106m) and on time scales from milliseconds to a few billion years; for example, from the biophysical processes of photosynthesis to those of biological evolution. Such analysis creates an interface that demands insight into both biology and mathematics.
Microbial ecology is also a field that evolves rapidly. Molecular techniques have allowed experimentalists to address questions concerning, for example, microbial diversity, unanswerable with traditional methods. Micro-organisms unknown a few decades ago have been shown to be among the most abundant organisms on earth such as, for example, the tiny cyanobacteria dominating primary production in large parts of the ocean, and SAR11, a bacterium which is probably the most abundant organism on earth, but whose function in the ecosystem is still obscure.
The objective of this workshop is to describe areas in microbial ecology where the tools of mathematics have been used to provide insight into the phenomena.
Schedule |
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| Monday, May 15 | |||
| 8:45-9:00am | Welcome: Avner Friedman | ||
| 9:00-9:45am | Introduction: George Jackson | ||
| 9:45-10:15am | Discussion/Coffee Break | ||
| 10:15-11:15am | James P. Grover: Stoichometry in microbial food webs | ||
| 11:15-1:00pm | Lunch Break | ||
| 1:00-2:00pm | Jarl Giske: The use of Individual Based Models (IBMs) | ||
| 2:00-2:30pm | Discussion/Coffee Break | ||
| 2:30-3:30pm | Michael Dowd: Statistical methods in modelling (MCMC etc.) | ||
| 3:30-4:30pm | Summary discussion General principles | ||
| 5:00-7:00pm | Reception with poster presentations | ||
| Tuesday, May 16 | |||
| 9:00-10:00am | Tom Curtis: Microbial distributions math perspective | ||
| 10:00-10:30am | Discussion/Coffee Break | ||
| 10:30-11:30am | Åke Hagstrøm: Microbial distributions, biological perspective | ||
| 11:30-1:00pm | Lunch Break | ||
| 1:00-2:00pm | Mary Lunn: Samples and Simulation | ||
| 2:00-2:30pm | Discussion/Coffee Break | ||
| 2:30-3:30pm | Andy Visser: The role of turbulence and small scale processes | ||
| 3:30-4:30pm | Summary discussion Probabilistic models/microbial distributions | ||
| 7:00pm | Public Lecture Series: Thomas Kiorboe: Blind dating: the secret life of pelagic copepods | ||
| Wednesday, May 17 | |||
| 9:00-10:00am | Laurent Seuront: Small scale distributions of microbes | ||
| 10:00-10:30am | Discussion/Coffee Break | ||
| 10:30-11:30am | Thomas Kiørboe: Particle colonization | ||
| 11:30-1:00pm | Lunch Break | ||
| 1:00-2:00pm | Dick van Oevelen: The role of bacterial carbon in marine benthic food webs: Integrating experimental 13C isotope data with models | ||
| 2:00-2:30pm | Discussion/Coffee Break | ||
| 2:30-3:30pm | Alain Vezina: Inverse methods | ||
| 3:30-4:30pm | Summary discussion. Models and data. | ||
| Thursday, May 18 | |||
| 9:00-10:00am | Mark Moore: Primary producers from the organism perspective | ||
| 10:00-10:30am | Discussion/Coffee Break | ||
| 10:30-11:30am | Dannie Grunbaum: Plankton models | ||
| 11:30-1:00pm | Lunch Break | ||
| 1:00-2:00pm | Jef Huisman: Light/plankton models/chaos | ||
| 2:00-2:30pm | Discussion/Coffee Break | ||
| 2:30-3:30pm | Joe Vallino: Does non-equilibrium thermodynamics govern metabolic network expression in microbial communities? | ||
| 3:30-4:30pm | Summary discussion: Phyto-Zooplankton. | ||
| 6:00-9:00pm | Banquet dinner at Holiday Inn | ||
| Friday, May 19 | |||
| 9:00-10:00am | Bernie Boudreau: Modelling microbial diagenesis | ||
| 10:00-10:30am | Discussion/Coffee Break | ||
| 10:30-11:30am | Peter Jumars: Unsteady environments of benthic marine microbes | ||
| 11:30-12:30pm | Final summary discussion. Conclusions | ||