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CTW: Mathematical Challenges in Biomolecular/Biomedical Imaging and Visualization: Schedule

Schedule
Monday, February 18
Introduction to biomedical imaging and visualization
(Morning session Chair: Guowei Wei; Afternoon session chair: Michael Knopp)
8:00am Shuttle leaves for MBI
8:15-8:45am Breakfast
8:45-9:00am Welcome, overview of workshop, and introductions: Marty Golubitsky
9:00-9:50am Michael Knopp
9:50-10:20am Break
10:20-10:50am Edward G. Walsh: Incorporation of Prior Fourier Domain Edge Information in the L1 Minimization Problem for Compressed Sensing
10:50-11:20am Chiu-Yen Kao - Semiautomatic Extraction Algorithm for Images of the Ciliary Muscle
11:20-11:50am Anne Gelb: Numerical Approximation Methods for Non-Uniform Fourier Data
11:50-1:50pm Lunch break
1:50-2:40pm P. Nithiarasu - Subject-specific modelling of endothelial dysfunction map
2:40-3:10pm Break
3:10-3:40pm Haomin Zhou: An Orthogonal Solution and Kernel Correction Algorithm for Inverse Source Problems with Applications in Fluorescence Tomography
3:40-4:10pm Weihong Guo: Effectiveness of Using Prior Information in Compressive Sensing and Image Denoising
4:10-4:40pm Informal discussion
4:40-6:30pm Reception and poster session in MBI Lounge
6:30pm Shuttle pick-up from MBI
Tuesday, February 19
Mathematical methods for biomedical imaging and visualization
(Morning session Chair: Anne Gelb; Afternoon session chair: Haomin Zhou)
8:15am Shuttle leaves for MBI
8:45-9:00am Breakfast
9:00-9:50am Rosemary Renaut: Signal and image restoration: solving ill-posed inverse problems
9:50-10:20am Break
10:20-10:50am Guohui Song: Convolutional Gridding and Fourier Frame Approximation
10:50-11:20am Zhan Chen: Differential geometry based multiscale modeling of solvation
11:20-11:50am Kelin Xia: Geometric modeling of subcellular structures, organelles, and multiprotein complexes
11:50-1:50pm Lunch break
1:50-2:40pm Larry Carrin
2:40-3:10pm Break
3:10-3:40pm Ming Yan: General Convergent Expectation Maximization (EM)-Type Algorithms for Image Reconstruction
3:40-4:10pm Adityavikram Viswanathan: Incorporating Edge Information in Fourier Reconstruction Schemes with Application to Magnetic Resonance Imaging
4:10-4:40pm Informal discussion
4:50pm Shuttle pick-up from MBI
Wednesday, February 20
Introduction to biomolecular imaging, surface and visualization
(Morning session Chair: Yang Wang; Afternoon session chair: Wah Chiu)
8:15am Shuttle leaves for MBI
8:45-9:00am Breakfast
9:00-9:50am Wah Chiu: Visualizing molecular machines inside and outside the cells
9:50-10:20am Break
10:20-10:50am Niels Volkmann - Extracting structural information from electron tomograms
10:50-11:20am Shan Zhao: Operator splitting ADI schemes for nonlinear biomolecular solvation models
11:20-11:50am Amit Singer: Finding three-dimensional ab-initio structure for single particle reconstruction using cryo-electron microscopy
11:50-1:50pm Lunch break
1:50-2:40pm Yang Wang - The Phase Retrieval Problem
2:40-3:10pm Break
3:10-3:40pm Malena Espanol - Multilevel Methods for Image Deblurring
3:40-4:10pm Jie Ma: ct Measurements of Transcription Under Torsion
4:10-4:40pm Informal discussion
4:50pm Shuttle pick-up from MBI
Thursday, February 21
Mathematical methods for biomolecular imaging, surface and visualization
(Morning session Chair: Art Olson; Afternoon session chair: Chandra Bajaj)
8:15am Shuttle leaves for MBI
8:45-9:00am Breakfast
9:00-9:50am Chandra Bajaj: Modeling, Analysis and Validation of Molecular Interactions from X-ray and Electron Microscopy
9:50-10:20am Break
10:20-10:50am Eric Sun: Geometric Blind Source Separation Methods and Their Applications in NMR Spectroscopy
10:50-11:20am Dexuan Xie: Finite Element Program Package for Solving a Nonlocal Dielectric Model for Protein in Salt Soluiton
11:20-11:50am Benzhuo Lu: Biomolecular surface/volume meshing and visualization for mathematical modeling
11:50-1:50pm Lunch break
1:50-2:40pm Art Olson: Challenges in Interacting with Protein Interactions
2:40-3:10pm Break
3:10-3:40pm Yiying Tong - Tunnels, Handles and Bottlenecks
3:40-4:10pm Zeyun Yu
4:10-4:40pm Informal discussion
4:40-5:10pm Photo on the steps of Jennings Hall
5:20pm Shuttle pick-up from MBI
6:20-7:00pm Cash bar at Crowne Plaza (Fusion Room)
7:00pm Banquet in the Fusion Room @Crowne Plaza Hotel
Friday, February 22
Mathematical methods for biomolecular imaging, surface and visualization
(Chair: P. Nithiarasu)
8:15am Shuttle leaves for MBI
8:45-9:00am Breakfast
9:00-9:50am Deok-Soo Kim: Molecular geometry: a unified theory for understanding geometry in molecular worlds
9:50-10:20am Break
10:20-10:50am Jack Quine: Mathematical Techniques in Structural Biology
10:50-11:20am Jason Cantarella: The geometry of the manifold of space polygons, with applications to statistical physics of polymers and 3d shape registration for proteins and biomolecules.
11:20-11:50am Information Discussion
12:00pm One Shuttle back to hotel
One Shuttle to Columbus Airport (CMH)